#genome
stringclasses 121
values | asm_name
stringclasses 120
values | assembly_accession
stringclasses 120
values | bioproject
stringclasses 45
values | biosample
stringclasses 120
values | wgs_master
float64 | seq_rel_date
stringclasses 98
values | submitter
stringclasses 76
values | ftp_path
stringclasses 120
values | img_id
float64 637M
2.51B
⌀ | gtdb_id
stringclasses 120
values | scope
stringclasses 3
values | assembly_level
stringclasses 1
value | genome_rep
stringclasses 1
value | refseq_category
stringclasses 3
values | release_type
stringclasses 2
values | taxid
float64 1.15k
681k
⌀ | species_taxid
float64 7
911k
⌀ | organism_name
stringclasses 120
values | infraspecific_name
stringclasses 112
values | isolate
stringclasses 1
value | superkingdom
stringclasses 2
values | phylum
stringclasses 18
values | class
stringclasses 30
values | order
stringclasses 56
values | family
stringclasses 75
values | genus
stringclasses 89
values | species
stringclasses 117
values | classified
bool 1
class | lv1_group
stringclasses 2
values | lv2_group
stringclasses 13
values | score_faa
float64 0.93
1
⌀ | score_fna
float64 0.88
1
⌀ | score_rrna
float64 0.1
1
⌀ | score_trna
float64 0.6
1
⌀ | total_length
float64 618k
9.12M
⌀ | contigs
float64 1
22
⌀ | gc
float64 22.5
72.2
⌀ | n50
float64 616k
9.03M
⌀ | l50
float64 1
1
⌀ | proteins
float64 525
7.92k
⌀ | protein_length
float64 172k
2.68M
⌀ | coding_density
float64 74
96.9
⌀ | completeness
float64 76.3
100
⌀ | contamination
float64 0
4.4
⌀ | strain_heterogeneity
float64 0
100
⌀ | markers
float64 124
383
⌀ | 5s_rrna
stringclasses 2
values | 16s_rrna
stringclasses 1
value | 23s_rrna
stringclasses 1
value | trnas
float64 14
20
⌀ | draft_quality
stringclasses 2
values | start_position
int64 0
10M
| human_label
int64 0
1
| autotrain_text
stringlengths 150
150
| autotrain_label
class label 121
classes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,875,000
| 1
|
TCAGGCAGTCTGCGGCCTCTCGTGTCTGGCATCTGCAGTGCAGCTGTGGGCTTCGAGCTCCATCTGTGCTGTTTCCTGGGTCAGCGCCTCCTTCCCTTTTATGGTCACATAATGTTCCCACCATAATTTTCCTTTGCAGTGACTTTGAAA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 6,348,000
| 1
|
CAGTGGAAACAGCCTTCAGCCCGGACTCAGAAGACCTGGGTTCTGCACTTAACTGCTGTGTGATCTTAGATGAGTTACTTAATCCTTCTGGGGTAGCAAAAAGAATGCTCTCCTCATAAAGTTTCTGTGGAGATGAAAAAAGGCAAAAGA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 454,800
| 1
|
ACCTGCTGCTGGGCCACACCTGGACTCAGCTCTACTGAGGACTTCCTTTCCTCAGTTTCTCACCTGGCCCTGCCAGATCTTCCTGGCCCTGCCCAGCCAAGGCCCCTCCCCCAGTCAACAACCCTCAGAAAGGCTCCTCCCCCCTTCTCT
| 120homo sapiens
|
G000009925
|
ASM992v1
|
GCF_000009925.1
|
PRJNA58195
|
SAMD00061068
| null |
2004/09/16
|
Kitasato Univ.
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/925/GCF_000009925.1_ASM992v1
| 637,000,025
|
RS_GCF_000009925.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 295,405
| 817
|
Bacteroides fragilis YCH46
|
strain=YCH46
| null |
Bacteria
|
Bacteroidetes
|
Bacteroidia
|
Bacteroidales
|
Bacteroidaceae
|
Bacteroides
|
Bacteroides fragilis
| true
|
Eubacteria
|
Bacteroidetes
| 1
| 0.998
| 0.9
| 1
| 5,310,990
| 2
| 43.2
| 5,277,274
| 1
| 4,416
| 1,603,639
| 88.979964
| 99.26
| 0
| 0
| 347
|
yes
|
yes
|
yes
| 20
|
high
| 3,528,330
| 0
|
ATCGCTTGCGAAATAGCACAGGTTATTCGTGATAAACAGAAAGCAGGACGTTTCTGCGTACTGGCATTGCCGGGTGGAAATTCTCCGCGCAGCGTATATGCCGAATTAATTCGCATGCACAAAGAAGAGGGACTCAGTTTCCGTAACGTA
| 10Bacteroides fragilis YCH46
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 1,584,600
| 1
|
TGAGTCCAGGAGCTCGAGAACAGCCTGGGCAGCATAGCGAGACCCTGTTCCTACAAAAATAAATACAAAATAATTAGCTGGGCATGGTGGCACGGGCCTGTGGTCCTAGCTGCTTGGGAGGCTGAGGTGGGAGGATCGCCTGAGCCTGGG
| 120homo sapiens
|
G000009825
|
ASM982v1
|
GCF_000009825.1
|
PRJNA224116
|
SAMD00061074
| null |
2004/12/30
|
Kao Corporation, Biological Science Laboratories, Japan
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/825/GCF_000009825.1_ASM982v1
| 637,000,019
|
RS_GCF_000009825.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 66,692
| 79,880
|
Bacillus clausii KSM-K16
|
strain=KSM-K16
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Bacillaceae
|
Bacillus
|
Bacillus clausii
| true
|
Eubacteria
|
Firmicutes
| 1
| 1
| 1
| 1
| 4,303,871
| 1
| 44.75
| 4,303,871
| 1
| 4,304
| 1,270,194
| 86.940919
| 98.67
| 0.33
| 0
| 373
|
yes
|
yes
|
yes
| 20
|
high
| 4,217,070
| 0
|
AGGCCGCCAGCTTCATGCGAACGTTGAATATTACGCTGCTGCAATCATGGAAGCACTTCGCCTTAAACCCGATTGGTTCACACCGACATTTTGTGTAAGCCGCGTCGTCGGATGGTGCAGCCATGTCATCGAACAAAGCCAAGACAACCG
| 8Bacillus clausii KSM-K16
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,782,000
| 1
|
TGTTATGGTTCACTGCAGCCTCGACTTCATGGACTCAAGTGATCCTCCCATTTCAGCCTCCTGAGTAGCTGGGACTACAGGGGGCAGGTGCCACCATGGCCAGCTAATTTATTTTGTAGAGATGGGTTTCACTATGTTGCCCAGGCTGGT
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 391,800
| 1
|
CCCCTCCGCCCCTCCATTCAGGGGCCTCTCCAGGAGCCTGGGGTGTGGCCCAGCAGTGGGATCCACTCACGAGTCCCGTCTCCACCTGCCCTCCCCAGGCGGCGGGAGCCTGTTTGCCATCCACGGAGACTGTGAGGCCTACGACACGCG
| 120homo sapiens
|
G000010785
|
ASM1078v1
|
GCF_000010785.1
|
PRJNA224116
|
SAMD00060961
| null |
2010/02/11
|
The University of Tokyo
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/785/GCF_000010785.1_ASM1078v1
| 646,311,936
|
RS_GCF_000010785.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 608,538
| 940
|
Hydrogenobacter thermophilus TK-6
|
strain=TK-6
| null |
Bacteria
|
Aquificae
|
Aquificae
|
Aquificales
|
Aquificaceae
|
Hydrogenobacter
|
Hydrogenobacter thermophilus
| true
|
Eubacteria
|
Bacteria
| 1
| 1
| 0.8
| 1
| 1,743,135
| 1
| 44
| 1,743,135
| 1
| 1,905
| 573,308
| 96.888881
| 98.78
| 0.51
| 0
| 310
|
yes
|
yes
|
yes
| 20
|
high
| 168,090
| 0
|
CTATGAGGAAAGCCATTATAAAGGGAAGCACTTTAAGCTCCGGTATCGCGTTGGGGTCTATATGCTTCATGCCTATGTAGTGGTTTAGAAGGTTTATGTTGTAAAGGTCAAACTCCGTACCGCCGGTTATCCTGTTTACCCATATGAACA
| 49Hydrogenobacter thermophilus TK-6 ASM1078v1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 8,855,550
| 1
|
CTACCCTGGTGACTTAGGGTCGTGACTGCACCCCGGGCTCGCCTCTCTCGGCTCTGGCTGGCCACGACCTTCCTTTTGAAGGTGCCTGGAGGGTGACTCCGTGTTTCTTGTTTCCTCGTGGGGGATTTTAAATTTATGTCACTGGTGGTT
| 120homo sapiens
|
G000010345
|
ASM1034v1
|
GCF_000010345.1
|
PRJNA224116
|
SAMD00060915
| null |
2007/07/11
|
Japan Agency for Marine-Earth Science and Technology
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/345/GCF_000010345.1_ASM1034v1
| 640,753,056
|
RS_GCF_000010345.1
|
Monoisolate
|
Complete Genome
|
Full
|
na
|
Major
| 387,093
| 387,093
|
Sulfurovum sp. NBC37-1
|
strain=NBC37-1
| null |
Bacteria
|
Proteobacteria
|
Epsilonproteobacteria
| null | null |
Sulfurovum
|
Sulfurovum sp. NBC37-1
| true
|
Eubacteria
|
Proteobacteria
| 1
| 1
| 0.9
| 1
| 2,562,277
| 1
| 43.87
| 2,562,277
| 1
| 2,552
| 795,482
| 91.463999
| 99.59
| 0.61
| 0
| 334
|
yes
|
yes
|
yes
| 20
|
high
| 694,070
| 0
|
CACGGGAAAAAGGTCCTCAGAGGCCCTGACATCCGCAAAGAGAGCCTGACCTCTATGATCAACTCCGTTAACAGCTACCATAAGATCATGCCCCGCTATTACCTGACCGATGAAGAGGTAAAGGCGATCTACGACTACCTTCAGAAGAAA
| 98Sulfurovum sp. NBC37-1 ASM1034v1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 8,980,800
| 1
|
CATACATATTTATTTATTTAAACAGACTTTATATTTTAGGCAGTTTTAGTTCACAGCAAATTTGAGCAGAAAATGCAGAGGTCCCATAGACTTCCTTACCCAACATACCCACGGCCTCCCGCTCTGTCAACACCCTGCAGCTGATTCATC
| 120homo sapiens
|
G000008345
|
ASM834v1
|
GCF_000008345.1
|
PRJNA224116
|
SAMN02603281
| null |
2004/07/30
|
Goettingen Genomics Laboratory
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/345/GCF_000008345.1_ASM834v1
| 637,000,215
|
RS_GCF_000008345.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 267,747
| 1,747
|
Propionibacterium acnes KPA171202
|
strain=KPA171202
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Propionibacteriales
|
Propionibacteriaceae
|
Cutibacterium
|
Cutibacterium acnes
| true
|
Eubacteria
|
Actinobacteria
| 1
| 1
| 1
| 1
| 2,560,265
| 1
| 60.01
| 2,560,265
| 1
| 2,373
| 780,330
| 89.799572
| 100
| 0
| 0
| 319
|
yes
|
yes
|
yes
| 20
|
high
| 2,161,250
| 0
|
ATGGACGAGCTTTTATCCGAGATCGCCGCCTTGTCTGACAAAGTGAGCGTCGGTAAGCCCGTCGACAATGAGCGCACCCCCTCCTTTGCCATCACCCGCCCCGGAAGCCCCATCGACATCCGCTTTGCGGGCCTGCCGATGGGCCACGAA
| 77Propionibacterium acnes KPA171202
|
G000008545
|
ASM854v1
|
GCF_000008545.1
|
PRJNA57723
|
SAMN02603986
| null |
2001/01/09
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/545/GCF_000008545.1_ASM854v1
| 637,000,321
|
RS_GCF_000008545.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 243,274
| 2,336
|
Thermotoga maritima MSB8
|
strain=MSB8
| null |
Bacteria
|
Thermotogae
|
Thermotogae
|
Thermotogales
|
Thermotogaceae
|
Thermotoga
|
Thermotoga maritima
| true
|
Eubacteria
|
Bacteria
| 1
| 1
| 0.9
| 1
| 1,860,725
| 1
| 46.25
| 1,860,725
| 1
| 1,866
| 602,696
| 95.430706
| 100
| 1.79
| 100
| 312
|
yes
|
yes
|
yes
| 20
|
high
| 1,705,340
| 0
|
CTTGGAGCATTCGTCGGAATTTCACAGCAGTTCAAAGACGTCCCCGTCAACCACTGGGCCTACGAAGCGGTAATGGAAATGTCGAAACTCGGTGTTCTCACTGGAATGCCGGATGGAACGTTCCAGGGTAACTCCTACCTCACCAGGTAT
| 103Thermotoga maritima MSB8 ASM854v1
|
G000007345
|
ASM734v1
|
GCF_000007345.1
|
PRJNA224116
|
SAMN03081414
| null |
2002/04/03
|
Broad Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/345/GCF_000007345.1_ASM734v1
| 638,154,508
|
RS_GCF_000007345.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 188,937
| 2,214
|
Methanosarcina acetivorans C2A
|
strain=C2A
| null |
Archaea
|
Euryarchaeota
|
Methanomicrobia
|
Methanosarcinales
|
Methanosarcinaceae
|
Methanosarcina
|
Methanosarcina acetivorans
| true
|
Archaea
|
Euryarchaeota
| 0.98
| 1
| 0.8
| 0.9
| 5,751,492
| 1
| 42.68
| 5,751,492
| 1
| 4,884
| 1,470,904
| 75.340086
| 99.84
| 0.03
| 0
| 229
|
no
|
yes
|
yes
| 18
|
medium
| 1,754,090
| 0
|
AGCAACCGTAAATGAGGTCCTCAAGCTCACTATGGGTAAAGGTATAGAAACCCTTGCAACGCTTGAGGGCGAAAAAGCCGAAATTATTGAGTATACCGCATCCAGGCAGTCAAAAATCGTGGGAAAAACACTCAGCAAGGTCAAGTTTCC
| 61Methanosarcina acetivorans C2A
|
G000006725
|
ASM672v1
|
GCF_000006725.1
|
PRJNA224116
|
SAMN02603773
| null |
2004/06/04
|
Sao Paulo state (Brazil) Consortium
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/725/GCF_000006725.1_ASM672v1
| 637,000,348
|
RS_GCF_000006725.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 160,492
| 2,371
|
Xylella fastidiosa 9a5c
| null | null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Xanthomonadales
|
Xanthomonadaceae
|
Xylella
|
Xylella fastidiosa
| true
|
Eubacteria
|
Proteobacteria
| 0.98
| 0.993
| 0.9
| 1
| 2,731,750
| 3
| 52.62
| 2,679,306
| 1
| 2,664
| 765,931
| 82.59299
| 99.59
| 0.18
| 0
| 325
|
yes
|
yes
|
yes
| 20
|
high
| 1,284,920
| 0
|
TGCCGACGGCGACGGCTTCACCGTGGTTGAGGTTGTTGCTTCCTGGTGTGCTGTAGCCCTGTGCTGTTTCGATGGCGTGGCCGAAGGTATGGCCGAGATTGAGCAGGACGCGTTCCCCTTTTTCCAGTGGGTCACGTCCGACAATATCGG
| 114Xylella fastidiosa 9a5c
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,675,650
| 1
|
ATATTAGTCAGGGTTCTCTAGAGGGACAGAACTAATAGGATAGATGTATATGGAAAGGGGAGTTTATTAAGGAGAATTAACTCACACAATTACAAGGTGAAGTCCCACAATAGGCAATCTGCAAATTGAGGAGCAAGGAAGCTAGTGGTG
| 120homo sapiens
|
G000008505
|
ASM850v1
|
GCF_000008505.1
|
PRJNA58089
|
SAMN02598265
| null |
2004/12/27
|
DOE Joint Genome Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/505/GCF_000008505.1_ASM850v1
| 637,000,023
|
RS_GCF_000008505.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 281,309
| 1,428
|
[Bacillus thuringiensis] serovar konkukian str. 97-27
|
strain=97-27
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Bacillaceae
|
Bacillus
|
Bacillus thuringiensis
| true
|
Eubacteria
|
Firmicutes
| 1
| 0.998
| 1
| 1
| 5,314,794
| 2
| 35.37
| 5,237,682
| 1
| 5,361
| 1,516,528
| 84.049767
| 99.07
| 0.31
| 0
| 381
|
yes
|
yes
|
yes
| 20
|
high
| 309,790
| 0
|
AATATGCTTGTGACATTTTAGATGAATTAAATATACCGTATGAGAAAAAGGTTGTATCCGCTCATCGGACTCCAGATTATATGTTTGAATATGCAGAGACGGCTCGTGAACGTGGATTGAAAGTTATTATTGCTGGAGCTGGTGGAGCAG
| 118[Bacillus thuringiensis] serovar konkukian str. 97-27
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 9,466,950
| 1
|
ACCATGCCCAGCTAATTTTTTGTATTTTTAGTAGACCCGGGGTTCCCCCATCTTGGCCAGGCTGGTCTCGAACTCCTGATCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGTGCCCAGCCAAT
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 1,621,800
| 1
|
TGAAGGCACTTACCTAAATACTGCCGTGTTGCCAGTAGCGTGCCGGTTACCAGTTTGGCCGTTCTTGTACACAATGTGTGAGTAATGCTGTGCTCGTCAGAGGGGAGACTTTTATATTCAGTAATTTGTTTTATAAATTAAAGTGAAGGA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 8,628,450
| 1
|
TGGGAGTTCAAGACCAGTCTGACCAACATGGAGAAACCCCGTCTCTACTAAAATACAAAATTAGCTGGGCGTGATGGCATGTGCCTGTAATCCCAGCTACTCTGGAGGCTGAGACAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,761,150
| 1
|
CCATCATTCAGATTTCTCATGGCATAGCCCTAGCCCCCCACCCCACTATCGGAGGAAACACAGTTTCCTGATAGGGTGGGCAAGGGGAGCAGGTTTCCCATCCCCCATTTCCTGTTGCTGACTCATGAAGAATGTGGTGAAGAGGCTTCC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 6,941,550
| 1
|
CAGTCTATCGTTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATCGTGAATAGTGCTGCAATAAACATACGTGTGCGTGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAAT
| 120homo sapiens
|
G000007525
|
ASM752v1
|
GCF_000007525.1
|
PRJNA57939
|
SAMN02603675
| null |
2005/01/21
|
Nestle Research Center, Switzerland
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/525/GCF_000007525.1_ASM752v1
| 637,000,031
|
RS_GCF_000007525.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 206,672
| 216,816
|
Bifidobacterium longum NCC2705
|
strain=NCC2705
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Bifidobacteriales
|
Bifidobacteriaceae
|
Bifidobacterium
|
Bifidobacterium longum
| true
|
Eubacteria
|
Actinobacteria
| 1
| 0.996
| 0.9
| 1
| 2,260,266
| 2
| 60.13
| 2,256,640
| 1
| 1,833
| 667,063
| 86.967994
| 100
| 0
| 0
| 289
|
yes
|
yes
|
yes
| 20
|
high
| 685,360
| 0
|
AAGACTTGTCACAAAGTCGCGTGATGACGCAGCCGCCGTTCAGGTGGATATGCCACGCTGTCATGATGACGGCCGAGCCGGAACACGGCAAATCCCGCATGCTGCATAGGCCAGCCGGTCACGGTCAGCCATGACACCGAAATATTGGAG
| 13Bifidobacterium longum NCC2705
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,918,800
| 1
|
AAGACTCCGTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTCTTGGTTCACAGCAGTCAAAAGAACCACAAAGGAGCAGTAGTTTCTAAGCT
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 3,261,000
| 1
|
AGACCAATGTAAAAACAAAGCATAATACATGTGATTTTCAAACATGCTGGACCTCAGGCCAATGTGACAACATTTCCTGTGGTCCAAGTCCCCAAAACAATTAGAGATTCATATGGAAGACTACAAAATAATCAACAAAAGAGAAATTGG
| 120homo sapiens
|
G000009145
|
ASM914v1
|
GCF_000009145.1
|
PRJNA224116
|
SAMEA3138193
| null |
2003/05/06
|
DOE Joint Genome Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/145/GCF_000009145.1_ASM914v1
| 637,000,195
|
RS_GCF_000009145.1
|
Multiisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 228,410
| 915
|
Nitrosomonas europaea ATCC 19718
|
strain=ATCC 19718
| null |
Bacteria
|
Proteobacteria
|
Betaproteobacteria
|
Nitrosomonadales
|
Nitrosomonadaceae
|
Nitrosomonas
|
Nitrosomonas europaea
| true
|
Eubacteria
|
Proteobacteria
| 0.98
| 1
| 0.9
| 1
| 2,812,094
| 1
| 50.72
| 2,812,094
| 1
| 2,670
| 848,291
| 88.875656
| 99.97
| 0.74
| 25
| 352
|
yes
|
yes
|
yes
| 20
|
high
| 249,990
| 0
|
TTCCGGCTGTGATTGCCTATAACCGCTATGCCAGTGATACTGCTCAGCTGGCAACCCGCTACGAAAGTTTCATAGAGGAAGTATCCAACGTACTGCAGCGTCGTGTGGCTAAACCTCGGGATATGGCGAATTTCTCATGATTCAGCGTCG
| 69Nitrosomonas europaea ATCC 19718
|
G000011005
|
ASM1100v1
|
GCA_000011005.1
|
PRJDA20361
|
SAMD00060931
| null |
2009/12/25
|
NITE
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/005/GCA_000011005.1_ASM1100v1
| 2,505,679,075
|
GB_GCA_000011005.1
|
Monoisolate
|
Complete Genome
|
Full
|
na
|
Major
| 304,371
| 570,267
|
Methanocella paludicola SANAE
|
strain=SANAE
| null |
Archaea
|
Euryarchaeota
|
Methanomicrobia
|
Methanocellales
|
Methanocellaceae
|
Methanocella
|
Methanocella paludicola
| true
|
Archaea
|
Euryarchaeota
| 1
| 1
| 0.8
| 0.9
| 2,957,635
| 1
| 54.92
| 2,957,635
| 1
| 3,055
| 877,570
| 87.405714
| 100
| 0.65
| 0
| 198
|
no
|
yes
|
yes
| 17
|
medium
| 1,754,480
| 0
|
GGCAGCATGACCACGAACTTGGCACCCTTCGTATGGTCGCCGGGCACCCGGTCCTCCACCCATATACGGCCATGAAAATCGCGCACGAGCGTCTTCACCAGGTAGAGGCCCAGGCCTTTACCCTTAGCCCGGGTATTGCCGCGCTCGAAC
| 58Methanocella paludicola SANAE
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 1,427,250
| 1
|
TGGCATCGTCACGCGTTGCTGGTGGGAGTGTAAAGGGATACTCTGGAACACTGTTGGGCAATTTCTGTTTTCTTTTGTGACAGGGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGACACAATCACAGTTTACTACAGCCTCAAACTTC
| 120homo sapiens
|
G000008325
|
ASM832v1
|
GCF_000008325.1
|
PRJNA224116
|
SAMN02603968
| null |
2005/05/18
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/325/GCF_000008325.1_ASM832v1
| 637,000,166
|
RS_GCF_000008325.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 243,233
| 414
|
Methylococcus capsulatus str. Bath
|
strain=Bath
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Methylococcales
|
Methylococcaceae
|
Methylococcus
|
Methylococcus capsulatus
| true
|
Eubacteria
|
Proteobacteria
| 1
| 1
| 1
| 1
| 3,304,561
| 1
| 63.58
| 3,304,561
| 1
| 3,046
| 1,020,877
| 91.024466
| 99.2
| 0
| 0
| 357
|
yes
|
yes
|
yes
| 20
|
high
| 760,500
| 0
|
GGCTCCGTTCATGCTCAGCCCGGGCCGCTCGGGGCAAATTCCGTCGAACGGGAGCAAGCCGCGCCTCGGTCGGTCGACACCGCCCGCCCGCGGCTGCGGGTCATCCGCAGCACGCCCGAGGAGGCCGAAGCCCACGCCGCTCGCCTGGAG
| 63Methylococcus capsulatus str. Bath
|
G000010605
|
ASM1060v1
|
GCF_000010605.1
|
PRJNA224116
|
SAMD00060929
| null |
2008/04/08
|
The University of Tokyo
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
| 641,522,653
|
RS_GCF_000010605.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 455,632
| 1,911
|
Streptomyces griseus subsp. griseus NBRC 13350
|
strain=NBRC 13350
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Streptomycetales
|
Streptomycetaceae
|
Streptomyces
|
Streptomyces griseus
| true
|
Eubacteria
|
Actinobacteria
| 1
| 1
| 1
| 1
| 8,545,929
| 1
| 72.23
| 8,545,929
| 1
| 7,113
| 2,547,362
| 87.837226
| 99.84
| 0
| 0
| 357
|
yes
|
yes
|
yes
| 20
|
high
| 1,213,680
| 0
|
AGGCGGCGGCGCACGAGCGGTCCCGGCTGCCGGGGACGCAGAACCGCTGGTCGGGCAAGAAGGACCAGTCGTGGGTGCCGCTGCGCCCGGAGCGGGTGTGCGAGGTGGCCTACGACCACATGGAGGGCGACCGGTTCCGGCACACCACCC
| 96Streptomyces griseus subsp. griseus NBRC 13350
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 2,899,200
| 1
|
CGCCCAGCCCCCGTCCGCCCACCCAGCCCTCTGCCCGCCAGTGGAGCGGAGCCGAGAAGCAGGGAGTGCGGGAGGATGCCCGAGGTCTCACGTCAGGACCCTCGACGGGGGTGGGGTGGAGAGGGAGGTGGTGGGTGGGGTGGGTGGTGC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 5,316,900
| 1
|
ATGCATATATGCACCTGCGCCCATACATGCATGCACGTGTATGCATGCATACACATGCACATGTACCTATACATGTGTATACACAATATACATGCCATACACGCATGCATGCTCACCTGCAAGGGCATGCACACACACAAATAGCTCCTC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 6,803,400
| 1
|
AAACAGTGTTAGATGGTAGAGATAAACCCAGCCATATACATAATTGCATCAACTGTAAATGGCTTAAGCATTCCAATTAAAAGCTAGAGAGTATCAGACTGGACAAAAAAACCATAATACTCAATGACATGCTTTCTACAAGAAACACTT
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 5,837,550
| 1
|
TCTGGGTCACCTGTCGGGTGGGGTCTGGGTGTCTGTGGTTTTAAGAGTTCCCCAAGTGACCTTAATAGGCAGCAGAGACGAGGTCACAGATCCAACCTCTCAGGGGAGGCGCCAACATCACCTCAAGTGGAGGAGACATACAGACCGGAT
| 120homo sapiens
|
G000007645
|
ASM764v1
|
GCF_000007645.1
|
PRJNA57861
|
SAMN02603126
| null |
2002/12/20
|
Chinese National HGC, Shanghai
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/645/GCF_000007645.1_ASM764v1
| 637,000,281
|
RS_GCF_000007645.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 176,280
| 1,282
|
Staphylococcus epidermidis ATCC 12228
|
strain=ATCC 12228
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Staphylococcaceae
|
Staphylococcus
|
Staphylococcus epidermidis
| true
|
Eubacteria
|
Firmicutes
| 1
| 0.977
| 0.9
| 1
| 2,564,615
| 7
| 32.05
| 2,499,279
| 1
| 2,354
| 721,937
| 82.93198
| 99.81
| 0
| 0
| 345
|
yes
|
yes
|
yes
| 20
|
high
| 1,283,620
| 0
|
AAGTGAATGGTTAACAGATTTAAACATCTCAGAAGACAATATGCGCCTTAGAGATCATGATGAAGATGAATTATCACACTATTCCAATGCTACTACTGATATTGAATATAAATTCCCATTTGGTTGGGGTGAATTATGGGGTATTGCGAG
| 88Staphylococcus epidermidis ATCC 12228 ASM764v1
|
G000007465
|
ASM746v2
|
GCF_000007465.2
|
PRJNA57947
|
SAMN02604090
| null |
2011/09/01
|
Univ. Oklahoma
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/465/GCF_000007465.2_ASM746v2
| 637,000,288
|
RS_GCF_000007465.2
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 210,007
| 1,309
|
Streptococcus mutans UA159
|
strain=UA159
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Lactobacillales
|
Streptococcaceae
|
Streptococcus
|
Streptococcus mutans
| true
|
Eubacteria
|
Firmicutes
| 1
| 1
| 0.9
| 1
| 2,032,925
| 1
| 36.83
| 2,032,925
| 1
| 1,897
| 591,301
| 85.692487
| 100
| 0
| 0
| 308
|
yes
|
yes
|
yes
| 20
|
high
| 1,471,600
| 0
|
TTACCAGTTAAAACAATTGTCATCCCAGTTAAAGCAGCATCACTTGCTGTTTTTTTGCCGAGATAAGTCAAGTTCAAACCTGCTGTTTTTAACTCTATCAAAAGTTTCTGTGCGCCTGCTGTTGCAAAGTAAGTTTTTAAAGACTCTGCA
| 92Streptococcus mutans UA159
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 5,302,800
| 1
|
ATATTACTATCCCCATCATACAGAAAACGACACTGAGGGTCATAGTGGAGCAGTAGCTTGCGCAACACCATAGTGGGGCAGTAGCTTGCTCAACACCATAGTGGGGCAGTAGCTTGCTCAGCATGAGAATACCCTGGACTCCAAAGCCCA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 6,462,000
| 1
|
GTGTCCTCTGAGAAATGTGGACCGGAAGGATGAGGCATGCTCCCGGAAGTTAGCATCGCTCATGGCCCTCAGTCAGGGCATGGCAGAGGAACCACCCCTCTTGTAAAAGAGGCACACACAGCCCTCCTGCTGTAATCTGCCCCATGTCAC
| 120homo sapiens
|
G000008525
|
ASM852v1
|
GCF_000008525.1
|
PRJNA57787
|
SAMN02603995
| null |
1999/12/22
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/525/GCF_000008525.1_ASM852v1
| 637,000,132
|
RS_GCF_000008525.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 85,962
| 210
|
Helicobacter pylori 26695
|
strain=26695
| null |
Bacteria
|
Proteobacteria
|
Epsilonproteobacteria
|
Campylobacterales
|
Helicobacteraceae
|
Helicobacter
|
Helicobacter pylori
| true
|
Eubacteria
|
Proteobacteria
| 1
| 1
| 1
| 1
| 1,667,867
| 1
| 38.87
| 1,667,867
| 1
| 1,579
| 514,109
| 90.817493
| 99.36
| 0
| 0
| 275
|
yes
|
yes
|
yes
| 20
|
high
| 1,595,880
| 0
|
TCTAAATTGTGCGGCGTCTTTATTCAATAAAATATCTTTTTGATTTTGAAGCTCCACTTTAAAGGGAACAAGAAATCTTTGATTAAAAATTTCAATGACAGATTCCCATTCTTTCTGGTCTTTGCTAGCTTGTTTTATAATTTCTTCTAT
| 48Helicobacter pylori 26695 ASM852v1
|
G000007825
|
ASM782v1
|
GCF_000007825.1
|
PRJNA57975
|
SAMN02603340
| null |
2004/07/06
|
INRA
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/825/GCF_000007825.1_ASM782v1
| 637,000,017
|
RS_GCF_000007825.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 226,900
| 1,396
|
Bacillus cereus ATCC 14579
|
strain=ATCC 14579
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Bacillaceae
|
Bacillus
|
Bacillus cereus
| true
|
Eubacteria
|
Firmicutes
| 1
| 0.998
| 1
| 1
| 5,427,083
| 2
| 35.29
| 5,411,809
| 1
| 5,541
| 1,546,426
| 83.933929
| 98.18
| 0.58
| 18.18
| 383
|
yes
|
yes
|
yes
| 20
|
high
| 3,501,290
| 0
|
TAGTTCTCTCCACCATTTTCAGACCAGCTTGATCTGCTGCATTGTATAAAGTTGAAGATGTTTGACAAACACCACCGCCATATCCATCTACTAATTTACCATCAACTATTTCTTTCCCTAATTGATATCCTTTATCTGGTGTTGTATCAC
| 7Bacillus cereus ATCC 14579
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 737,550
| 1
|
TAGGGCCTGCCCCCAGGACAGCCTCAGGGAGCCCCTCGAACCCCAGTTAAATCACAGCCTAACCCCAAAACCCACTGGGCCAGGCCATTCTCATCTCCCCACTCCAGTCCATGCCCCACAGGGGTGAGGCACTTTCCCAGGGCAGTCGCT
| 120homo sapiens
|
G000010205
|
ASM1020v1
|
GCF_000010205.1
|
PRJNA224116
|
SAMD00060919
| null |
2008/05/29
|
Kitasato Institute for Life Sciences
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/205/GCF_000010205.1_ASM1020v1
| 642,555,145
|
RS_GCF_000010205.1
|
Monoisolate
|
Complete Genome
|
Full
|
na
|
Major
| 334,380
| 784
|
Orientia tsutsugamushi str. Ikeda
|
strain=Ikeda
| null |
Bacteria
|
Proteobacteria
|
Alphaproteobacteria
|
Rickettsiales
|
Rickettsiaceae
|
Orientia
|
Orientia tsutsugamushi
| true
|
Eubacteria
|
Proteobacteria
| 0.99
| 1
| 0.9
| 1
| 2,008,987
| 1
| 30.51
| 2,008,987
| 1
| 2,188
| 522,417
| 76.576503
| 99.51
| 0.49
| 0
| 186
|
yes
|
yes
|
yes
| 20
|
high
| 827,840
| 0
|
AAGTAGCATAGTTCAGGAAAAGCAAATAAAGTTTTTTATCCTATGGATATCTATTTACTTGGAAAAAGATAGCAAACAGATATCTTCGATATTACTTAGCTAAGTTAAACTATTTAACTTGCTGTAAAAACTTGCCAATATAACCTGTAA
| 72Orientia tsutsugamushi str. Ikeda
|
G000009925
|
ASM992v1
|
GCF_000009925.1
|
PRJNA58195
|
SAMD00061068
| null |
2004/09/16
|
Kitasato Univ.
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/925/GCF_000009925.1_ASM992v1
| 637,000,025
|
RS_GCF_000009925.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 295,405
| 817
|
Bacteroides fragilis YCH46
|
strain=YCH46
| null |
Bacteria
|
Bacteroidetes
|
Bacteroidia
|
Bacteroidales
|
Bacteroidaceae
|
Bacteroides
|
Bacteroides fragilis
| true
|
Eubacteria
|
Bacteroidetes
| 1
| 0.998
| 0.9
| 1
| 5,310,990
| 2
| 43.2
| 5,277,274
| 1
| 4,416
| 1,603,639
| 88.979964
| 99.26
| 0
| 0
| 347
|
yes
|
yes
|
yes
| 20
|
high
| 5,301,920
| 0
|
AGAAACCGAAGTACTGTCGGGATTCAAAGATAAAGAGGGGAACTCAATAGATAGAAAACTTATTGTAAATGATGATTTTAAGGTTAAGTTAGTATGAAAATAAGAATTGTAATTTACAATGAAGAGCTATTTCTTTCTGATAGTTTAGAC
| 10Bacteroides fragilis YCH46
|
G000008265
|
ASM826v1
|
GCF_000008265.1
|
PRJNA224116
|
SAMN02603345
| null |
2004/06/08
|
Institut of Microbiology and Genetics, University of Goettingen
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/265/GCF_000008265.1_ASM826v1
| 638,154,512
|
RS_GCF_000008265.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 263,820
| 82,076
|
Picrophilus torridus DSM 9790
|
strain=DSM 9790
| null |
Archaea
|
Euryarchaeota
|
Thermoplasmata
|
Thermoplasmatales
|
Picrophilaceae
|
Picrophilus
|
Picrophilus torridus
| true
|
Archaea
|
Euryarchaeota
| 0.99
| 1
| 0.8
| 0.9
| 1,545,895
| 1
| 35.97
| 1,545,895
| 1
| 1,599
| 485,076
| 92.441789
| 99.59
| 0
| 0
| 196
|
no
|
yes
|
yes
| 18
|
medium
| 1,340,690
| 0
|
GTTAATGATTTCAATAATTAATAATACACGAATCATCTATAAAAAAGAATAATCTATCGGCATTATAAAAATATTTATAACATAATATATTTTTTAATCATGGATGTAAAAATATCAATGGATACTGAAAACTGCAATAGCCTGATGATG
| 74Picrophilus torridus DSM 9790
|
G000006865
|
ASM686v1
|
GCF_000006865.1
|
PRJNA57671
|
SAMN02603339
| null |
2001/03/21
|
INRA
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/865/GCF_000006865.1_ASM686v1
| 637,000,144
|
RS_GCF_000006865.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 272,623
| 1,358
|
Lactococcus lactis subsp. lactis Il1403
|
strain=IL1403
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Lactobacillales
|
Streptococcaceae
|
Lactococcus
|
Lactococcus lactis
| true
|
Eubacteria
|
Firmicutes
| 1
| 1
| 1
| 1
| 2,365,589
| 1
| 35.33
| 2,365,589
| 1
| 2,383
| 693,662
| 86.378488
| 100
| 0
| 0
| 310
|
yes
|
yes
|
yes
| 20
|
high
| 98,150
| 0
|
CATTGTTCTATTGCAAAATGACCTTAGGAAAGTGACGACATCTATTGAAATCAGTCGTGATACGTTAAAAATTGCTAAACAAGCGGTCATGATTGGGATTATCATTTGTATTATTTTGATGTTTGTTGCAGCTCTGGGAGTGATTCCAGC
| 54Lactococcus lactis subsp. lactis Il1403 IL1403
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 1,847,250
| 1
|
ACGAAGACCTGACCACTGGCTCTGCGACGAGGTCACGGTAGCCTCCTGTTTAGGGTGTGTGTGGAGGCGGGGTTGCCTGGCAAGTAGGGGCTGAGGGGACCAGTGCAGCTCTAGGGACAAAAGGAAGGGGGTTCCTCAGAGGGCTGTTCT
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,687,050
| 1
|
AGCCTCAACCTCCTGGGCGCAGGCCATTCTCTCACCTTAGCCTCCCCAGTAGCTGGGACCACAGGTGTGCGCCACAGCACCTGGCTAATTTTCTTGGTCACTCCTACTTGCGTCCCTGCTGCCTTCGGAGTGGCCGCTTCTCCTTGCCTT
| 120homo sapiens
|
G000007565
|
ASM756v2
|
GCF_000007565.2
|
PRJNA57843
|
SAMN02603999
| null |
2016/02/26
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
| 637,000,222
|
RS_GCF_000007565.2
|
Multiisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 160,488
| 303
|
Pseudomonas putida KT2440
|
strain=KT2440
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Pseudomonadales
|
Pseudomonadaceae
|
Pseudomonas
|
Pseudomonas putida
| true
|
Eubacteria
|
Proteobacteria
| 1
| 1
| 0.9
| 1
| 6,181,873
| 1
| 61.52
| 6,181,873
| 1
| 5,584
| 1,861,131
| 88.706707
| 99.97
| 1.2
| 0
| 381
|
yes
|
yes
|
yes
| 20
|
high
| 4,420,130
| 0
|
GCGAATACCACGACATCGAATGCATGTTCGGCTTCAAAGTTCGCCGGGCCTGACCCTCCCGCGCTGCCCGCCAGCGCCTTCCCCTATTCAACGATAACGCCTCCCCGGCGAGGACCACCAATGCCCATCACCTACGGAAGCGTCTGCAGC
| 78Pseudomonas putida KT2440
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 8,837,100
| 1
|
ATTGATTTTGGATGTCAACTTGACTAGATTAAGGAATACCCAGGTAGATGGTAAAGCATTGATTATTCTCTATGCTTCAGTACACACTGAGCCTGTCCCTTTTCTGCTGACAGGGAAGCCCAGTGGTTTGACATTGTGTAGAATGATCGG
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 5,139,450
| 1
|
GGAGCTGGGAATGAGTGGCCACCGAGAAAGGAATCGAGTCACAGCCAACAGAGTAAGCTGTGTCACGTGATCCCAGAACATCAACCGCAAACAAGAAGACAGAATTTTTCCATTGATTTTGGCAACAACGTAACAGTTATTTGTGTCTCC
| 120homo sapiens
|
G000006865
|
ASM686v1
|
GCF_000006865.1
|
PRJNA57671
|
SAMN02603339
| null |
2001/03/21
|
INRA
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/865/GCF_000006865.1_ASM686v1
| 637,000,144
|
RS_GCF_000006865.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 272,623
| 1,358
|
Lactococcus lactis subsp. lactis Il1403
|
strain=IL1403
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Lactobacillales
|
Streptococcaceae
|
Lactococcus
|
Lactococcus lactis
| true
|
Eubacteria
|
Firmicutes
| 1
| 1
| 1
| 1
| 2,365,589
| 1
| 35.33
| 2,365,589
| 1
| 2,383
| 693,662
| 86.378488
| 100
| 0
| 0
| 310
|
yes
|
yes
|
yes
| 20
|
high
| 1,211,990
| 0
|
TTCAGATGATATCTTGCTAATCCTAATTTCCCCTTTGTATATCCAAGAGAGGTGGAATGAATCACAAGAGGTAAGAAGGCAGTTCAGACTGGGGAGCCACTCTCCTCAAGTACGCTTTCTAAGGTTAGGAATATTTTAAAACAAATTTTT
| 54Lactococcus lactis subsp. lactis Il1403 IL1403
|
G000010825
|
ASM1082v1
|
GCF_000010825.1
|
PRJNA224116
|
SAMD00060943
| null |
2009/08/26
|
Acetobacter pasteurianus genome sequencing consortium
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/825/GCF_000010825.1_ASM1082v1
| 644,736,321
|
RS_GCF_000010825.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 634,452
| 438
|
Acetobacter pasteurianus IFO 3283-01
|
strain=IFO 3283 substr. IFO 3283-01
| null |
Bacteria
|
Proteobacteria
|
Alphaproteobacteria
|
Rhodospirillales
|
Acetobacteraceae
|
Acetobacter
|
Acetobacter pasteurianus
| true
|
Eubacteria
|
Proteobacteria
| 1
| 0.982
| 0.9
| 1
| 3,340,249
| 7
| 53.1
| 2,907,495
| 1
| 3,156
| 1,006,859
| 88.810714
| 100
| 0
| 0
| 352
|
yes
|
yes
|
yes
| 20
|
high
| 1,009,060
| 0
|
ATATCTGCGGCAGCCTGATCCAATGCTTCAAACAGGCGTGTGCCGTCATGCCCGTTCTGGCGCACTGTAATGGTGCGGATATTCAACCCATCCACCTGCATATGCGCCAATGCATCCGCAGCCTGCCGGGCAATAGCCGCCCGCTGCCCG
| 0Acetobacter pasteurianus IFO 3283-01 IFO 3283 substr. IFO 3283-01
|
G000007085
|
ASM708v1
|
GCF_000007085.1
|
PRJNA224116
|
SAMN02603009
| null |
2002/05/14
|
Beijing Center.HGP
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/085/GCF_000007085.1_ASM708v1
| 637,000,318
|
RS_GCF_000007085.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 273,068
| 911,092
|
Caldanaerobacter subterraneus subsp. tengcongensis MB4
|
strain=MB4
| null |
Bacteria
|
Firmicutes
|
Clostridia
|
Thermoanaerobacterales
|
Thermoanaerobacteraceae
|
Caldanaerobacter
|
Caldanaerobacter subterraneus
| true
|
Eubacteria
|
Firmicutes
| 1
| 1
| 1
| 1
| 2,689,445
| 1
| 37.57
| 2,689,445
| 1
| 2,674
| 812,453
| 88.995016
| 99.04
| 0.6
| 0
| 329
|
yes
|
yes
|
yes
| 20
|
high
| 2,054,130
| 0
|
TTTCGCCTAAAATTTCAAAAGGATTTTCAATGACAAGCTCTAAATGCTCTGGAGCTATTTCATTTGCAATACCAATTGCTTCTTTTAAATTATCTATAACAATTATCGCGCCAAAATTTTTTAAAGACTCTGCAATTATTTCTTTTCGCT
| 18Caldanaerobacter subterraneus subsp. tengcongensis MB4
|
G000007805
|
ASM780v1
|
GCF_000007805.1
|
PRJNA57967
|
SAMN02604017
| null |
2003/03/05
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/805/GCF_000007805.1_ASM780v1
| 2,508,501,074
|
RS_GCF_000007805.1
|
Multiisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 223,283
| 251,701
|
[Pseudomonas syringae] pv. tomato str. DC3000
|
strain=DC3000
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Pseudomonadales
|
Pseudomonadaceae
|
Pseudomonas
|
Pseudomonas syringae group genomosp. 3
| true
|
Eubacteria
|
Proteobacteria
| 1
| 0.997
| 0.9
| 1
| 6,538,260
| 3
| 58.34
| 6,397,126
| 1
| 5,862
| 1,948,843
| 87.825109
| 100
| 0.22
| 0
| 381
|
yes
|
yes
|
yes
| 20
|
high
| 1,611,480
| 0
|
CGTCGCAAAGAGGACGCTGAGCATCCTGAACGGCATGTCGACGCGGAGCGTCGCACGATAGTGGTCGTAGCTGAGATTCTCGTTCCCTACGCTCCAGCGTGGGAATGCAGTTCTCGACGCTCTGCGTCGCAAAGAGGACGCTGAGCATCC
| 119[Pseudomonas syringae] pv. tomato str. DC3000
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,645,950
| 1
|
CGGACCCAGACGGAACAATGAAATGGAATAATAATGGAAATGGAAATAATGTAAATGGAATAATATAAATAATATAATGTATTATAATATAAATAATAATAATATATTCAATAATATAAATGGAAATCAAAGCCATGAGAGCAAATGGAA
| 120homo sapiens
|
G000006725
|
ASM672v1
|
GCF_000006725.1
|
PRJNA224116
|
SAMN02603773
| null |
2004/06/04
|
Sao Paulo state (Brazil) Consortium
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/725/GCF_000006725.1_ASM672v1
| 637,000,348
|
RS_GCF_000006725.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 160,492
| 2,371
|
Xylella fastidiosa 9a5c
| null | null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Xanthomonadales
|
Xanthomonadaceae
|
Xylella
|
Xylella fastidiosa
| true
|
Eubacteria
|
Proteobacteria
| 0.98
| 0.993
| 0.9
| 1
| 2,731,750
| 3
| 52.62
| 2,679,306
| 1
| 2,664
| 765,931
| 82.59299
| 99.59
| 0.18
| 0
| 325
|
yes
|
yes
|
yes
| 20
|
high
| 299,780
| 0
|
GCTGCATATTCGCGACCATATTTCTGTGGGTCAGCATTGCGCCTTTGGGTGTCCCCGTTGTGCCGCCGGTGTATTGTAGAAAAGCTAAATCGTCGCTGGCGATGTGGATTGGAGGCATGGAATGCTTGCTTCCCAGCGCGAGTGCTTCAC
| 114Xylella fastidiosa 9a5c
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 3,100,650
| 1
|
GTTGTGGGCTCTGGAAGCCCCGGTCATGAGGCCCCACCGCCCCGCCCGGCACTAAGTAAGTGGCTCTCAGGGAAATCATAACACGATTAGCAGCTTCCGGCCAGTCTCACGGGCGTTAGCCTACTCCTCGCTCCTACACAAACACGGCAG
| 120homo sapiens
|
G000009065
|
ASM906v1
|
GCF_000009065.1
|
PRJNA57621
|
SAMEA1705942
| null |
2003/05/06
|
Sanger Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/065/GCF_000009065.1_ASM906v1
| 637,000,351
|
RS_GCF_000009065.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 214,092
| 632
|
Yersinia pestis CO92
|
strain=CO92
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Enterobacterales
|
Yersiniaceae
|
Yersinia
|
Yersinia pestis
| true
|
Eubacteria
|
Proteobacteria
| 1
| 0.994
| 1
| 1
| 4,829,855
| 4
| 47.64
| 4,653,728
| 1
| 4,298
| 1,371,586
| 83.669593
| 99.82
| 0
| 0
| 372
|
yes
|
yes
|
yes
| 20
|
high
| 724,230
| 0
|
CTATTGCCTGCGTTAGTACTGGGTTAAGTTCATGACGGTGATACCAGTAAAAGCGTGATTACCAAACCGTTATAGGGTAAAAACAGAATTCAGGCGCGTTACTTAAGTAAAGAGAGAAGTATATGACATCAAAGCAATCCTCACCGGTGA
| 116Yersinia pestis CO92 ASM906v1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 5,593,800
| 1
|
CTAGGATCTCAAAGGAGTTAAAAGCGGGACTATTTCTAAACATAAGGCACTATGTAATTGGAAAGTGTGGCTGTTAACACTGTTTCCCTCCTAAAACTCATTGAGGAGTGGCTCTCAGAGGGTGAATGCTCACCACGCCCATGTGTGTGC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 4,504,500
| 1
|
TCAGGTAGTCATGAGACTCAGGTAAAAGGATGCATGCGAAGCTCATATCTGGCCCCCCTGACTGTCGCTTCCCTTCCTTCAGTGACAGCTGTTCGGAGACTCTCTCGTGTGTCCAACATTGCAGGTACGAGAGATCCTTGATGCTACCTC
| 120homo sapiens
|
G000010125
|
ASM1012v1
|
GCF_000010125.1
|
PRJNA224116
|
SAMD00061076
| null |
2005/08/12
|
Kitasato Institute for Life Sciences, Japan
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/125/GCF_000010125.1_ASM1012v1
| 637,000,284
|
RS_GCF_000010125.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 342,451
| 29,385
|
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
|
strain=ATCC 15305
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Staphylococcaceae
|
Staphylococcus
|
Staphylococcus saprophyticus
| true
|
Eubacteria
|
Firmicutes
| 1
| 0.992
| 1
| 1
| 2,577,899
| 3
| 33.19
| 2,516,575
| 1
| 2,502
| 730,892
| 83.519176
| 99.44
| 0
| 0
| 348
|
yes
|
yes
|
yes
| 20
|
high
| 130,910
| 0
|
ATAAAAATCGTATCTTCCAATCAGGATATGTTTATAGATTTGTGAAAGAGAATCGTCATTCTAATCAGGTATTAACTTTGACAAATTCAGACCAAATCCCGCATTTAGAAGAAATCGTACAAGCCCATCCAAATCTAGAGTTTCATGTTG
| 90Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 ASM1012v1
|
G000005825
|
ASM582v2
|
GCF_000005825.2
|
PRJNA224116
|
SAMN02603086
| null |
2010/12/15
|
Center for Genomic Sciences, Allegheny-Singer Research Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/825/GCF_000005825.2_ASM582v2
| 646,311,908
|
RS_GCF_000005825.2
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 398,511
| 79,885
|
Bacillus pseudofirmus OF4
|
strain=OF4
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Bacillaceae
|
Bacillus
|
Bacillus pseudofirmus
| true
|
Eubacteria
|
Firmicutes
| 1
| 0.995
| 1
| 1
| 4,249,248
| 3
| 39.86
| 3,858,997
| 1
| 4,260
| 1,228,222
| 85.144124
| 98.68
| 1.32
| 0
| 377
|
yes
|
yes
|
yes
| 20
|
high
| 2,008,240
| 0
|
ACCTGTTGTAAGAAGTGTTAGTCCGATAATGATCAGTAAATAATTTGTATATTCAACGTTTTGAGTGATAATTCCGTACCCGGCCAAACTAACCCCAGCAACAACCAACACAATCCTTAGTTTGTTAAGAATACAAATTCCCCTCCTATA
| 9Bacillus pseudofirmus OF4
|
G000008865
|
ASM886v1
|
GCF_000008865.1
|
PRJNA57781
|
SAMN01911278
| null |
2004/05/11
|
GIRC
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/865/GCF_000008865.1_ASM886v1
| 637,000,108
|
RS_GCF_000008865.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 386,585
| 562
|
Escherichia coli O157:H7 str. Sakai
|
strain=Sakai substr. RIMD 0509952
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Enterobacterales
|
Enterobacteriaceae
|
Escherichia
|
Escherichia coli
| true
|
Eubacteria
|
Proteobacteria
| 1
| 0.996
| 0.9
| 1
| 5,594,477
| 3
| 50.48
| 5,498,450
| 1
| 5,399
| 1,663,868
| 87.620737
| 99.97
| 0.33
| 0
| 374
|
yes
|
yes
|
yes
| 20
|
high
| 1,180,010
| 0
|
TAATATCCGACAGTAATCACTCTGCGCAATAGCGCGGCCTTTTTCGTATTGCGGGCTGTTGTCTCTCTTCTGCCATTGTCCTGTAACTTCCGGACTTCAGCCCGCTCCTCATTTTACTCACAATATTATCCCGGCCGGGAGGATTCATGG
| 38Escherichia coli O157:H7 str. Sakai Sakai substr. RIMD 0509952
|
G000009025
|
ASM902v1
|
GCF_000009025.1
|
PRJNA224116
|
SAMEA3138187
| null |
2005/08/19
|
Max Planck Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/025/GCF_000009025.1_ASM902v1
| 637,000,090
|
RS_GCF_000009025.1
|
Monoisolate
|
Complete Genome
|
Full
|
na
|
Major
| 255,470
| 61,435
|
Dehalococcoides mccartyi CBDB1
|
strain=CBDB1
| null |
Bacteria
|
Chloroflexi
|
Dehalococcoidia
|
Dehalococcoidales
|
Dehalococcoidaceae
|
Dehalococcoides
|
Dehalococcoides mccartyi
| true
|
Eubacteria
|
Chloroflexi
| 0.97
| 1
| 1
| 1
| 1,395,502
| 1
| 47.03
| 1,395,502
| 1
| 1,437
| 426,285
| 89.985038
| 99.01
| 0
| 0
| 259
|
yes
|
yes
|
yes
| 20
|
high
| 638,820
| 0
|
CCTGTCCCACAGAATACCCGCTATAAGGCTGGCGGGAAGCAGAGTCAGCCCGACTACACCCTGATACAAACCATAGGCAGTCCCCCGTTTATCAGACGGTATCATATCTGCCACAAAAGCCTTTGCCACCCCTTCCACAATCCCGTAGTA
| 34Dehalococcoides mccartyi CBDB1
|
G000008565
|
ASM856v1
|
GCF_000008565.1
|
PRJNA57665
|
SAMN02603976
| null |
2000/12/11
|
TIGR
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/565/GCF_000008565.1_ASM856v1
| 637,000,092
|
RS_GCF_000008565.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 243,230
| 1,299
|
Deinococcus radiodurans R1
|
strain=R1
| null |
Bacteria
|
Deinococcus-Thermus
|
Deinococci
|
Deinococcales
|
Deinococcaceae
|
Deinococcus
|
Deinococcus radiodurans
| true
|
Eubacteria
|
Terrabacteria
| 1
| 0.991
| 0.8
| 1
| 3,284,156
| 4
| 66.61
| 2,648,638
| 1
| 3,248
| 987,980
| 88.625967
| 98.72
| 0
| 0
| 359
|
yes
|
yes
|
yes
| 20
|
high
| 1,507,610
| 0
|
AGCGCCACGAGGATTTGCAGCACCGAGTGCCACCCTGGCCCCGCCGCGAGCGCCCCGCCGAAGACCCGCAGCATCCCGGCGAAGGCGGCCACCTTGACCACCGTGCTCAGGAACAGCGACACCAGCGTGGGCGCCCCGCTGTACACGTCG
| 35Deinococcus radiodurans R1 ASM856v1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 2,520,150
| 1
|
AAAATAGGTGGAAAGTCCCAGACCTAATGTGGAGGCTGGGGAAGCAGCCGGGCCGGGGAGGGCGGGGGCGGGGGCCTGTGTGTTTTTGCAGGACATGCACAAGGGTAAGAGGCTGTGCCCGGGGTGCTGTGACTGTGCCTTGTGACAGCA
| 120homo sapiens
|
G000010325
|
ASM1032v1
|
GCF_000010325.1
|
PRJNA224116
|
SAMD00060914
| null |
2007/07/11
|
Japan Agency for Marine-Earth Science and Technology
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/325/GCF_000010325.1_ASM1032v1
| 640,753,037
|
RS_GCF_000010325.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 387,092
| 387,092
|
Nitratiruptor sp. SB155-2
|
strain=SB155-2
| null |
Bacteria
|
Proteobacteria
|
Epsilonproteobacteria
| null | null |
Nitratiruptor
|
Nitratiruptor sp. SB155-2
| true
|
Eubacteria
|
Proteobacteria
| 1
| 1
| 1
| 1
| 1,877,931
| 1
| 39.69
| 1,877,931
| 1
| 1,933
| 610,396
| 95.761026
| 98.78
| 0
| 0
| 319
|
yes
|
yes
|
yes
| 20
|
high
| 870,220
| 0
|
AATGAGGCAACTAAAATGATTTTACCTAAATAGTTGTTGTTGTCATCATATATGGATAGAGGGAAGTACAGATCAAAATCATCAAATGTAGGAGAATTGATAGATTGATGATGAAGAGGAAAAGATCTAGGATATAAAATTTGTCCATCA
| 68Nitratiruptor sp. SB155-2 ASM1032v1
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,961,700
| 1
|
ATTAAATTAATGTGTTCAAAAGTTCCTCATGCTATTGCTTGAGCCCACCCCCTGTCATAGTCCCCCAAGCCTTGTGCCTCAGCCTCACTGGTCTGCCTAGATACTGGTCCTCACCTCTCCACCTTTGGGATGGCACGTGGACCTGGTGCA
| 120homo sapiens
|
G000010305
|
ASM1030v1
|
GCF_000010305.1
|
PRJNA224116
|
SAMD00060909
| null |
2009/04/01
|
National Institute of Technology and Evaluation
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/305/GCF_000010305.1_ASM1030v1
| 643,692,024
|
RS_GCF_000010305.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 379,066
| 173,480
|
Gemmatimonas aurantiaca T-27
|
strain=T-27
| null |
Bacteria
|
Gemmatimonadetes
|
Gemmatimonadetes
|
Gemmatimonadales
|
Gemmatimonadaceae
|
Gemmatimonas
|
Gemmatimonas aurantiaca
| true
|
Eubacteria
|
FCB
| 1
| 1
| 1
| 1
| 4,636,964
| 1
| 64.27
| 4,636,964
| 1
| 4,004
| 1,466,180
| 93.177023
| 98.9
| 4.4
| 0
| 353
|
yes
|
yes
|
yes
| 20
|
high
| 1,729,910
| 0
|
TGCGGTATGGGCGGCGGCACGGGTACTGGTGCGGCGCCAGTGGTGTGCCAGTTGGCGCGTGAGGCCGGTGCGCTCACCGTGGGTATCGTCACCCGCCCGTTCCTCTTCGAAGGGCGCAAGCGGATGCGTCAGGCCGAAGAGGGCATCAAC
| 42Gemmatimonas aurantiaca T-27
|
G000007385
|
ASM738v1
|
GCF_000007385.1
|
PRJNA224116
|
SAMN02603680
| null |
2005/02/02
|
NIAB, Rural Development Administration
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/385/GCF_000007385.1_ASM738v1
| 637,000,346
|
GB_GCA_000007385.1
|
Multiisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 291,331
| 347
|
Xanthomonas oryzae pv. oryzae KACC 10331
| null | null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Xanthomonadales
|
Xanthomonadaceae
|
Xanthomonas
|
Xanthomonas oryzae
| true
|
Eubacteria
|
Proteobacteria
| 1
| 1
| 0.9
| 1
| 4,941,439
| 1
| 63.69
| 4,941,439
| 1
| 4,831
| 1,427,680
| 85.113992
| 99.82
| 0
| 0
| 355
|
yes
|
yes
|
yes
| 20
|
high
| 1,544,660
| 0
|
GCGCGTAATTGGTAAGCCATGACCTGCATCAGGCTATCGGGTACCGGGTCGCGCCGCGCCTGTAACGCATTAGCCACCATGACGGTGGCGACCAGGCCGATCAGCACGCCCAGCACCAGCATGAAGGCGTAGCGGGCCGCGCGGGATTGG
| 113Xanthomonas oryzae pv. oryzae KACC 10331
|
G000007845
|
ASM784v1
|
GCF_000007845.1
|
PRJNA57909
|
SAMN02603432
| null |
2003/04/30
|
J. Craig Venter Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/845/GCF_000007845.1_ASM784v1
| 637,000,014
|
RS_GCF_000007845.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 198,094
| 1,392
|
Bacillus anthracis str. Ames
|
strain=Ames
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Bacillaceae
|
Bacillus
|
Bacillus anthracis
| true
|
Eubacteria
|
Firmicutes
| 1
| 1
| 1
| 1
| 5,227,293
| 1
| 35.38
| 5,227,293
| 1
| 5,474
| 1,495,110
| 84.244541
| 99.23
| 0.15
| 0
| 381
|
yes
|
yes
|
yes
| 20
|
high
| 5,212,740
| 0
|
GCAGCACGAGTAATAAAGCAAATATGACATATAGGTTAGAAAATACCATATGTAAATATGATGTCGGTTCTACTTTTATAAAAGTTGATAATAAAATAAATATAACGTAATACCAAACAATACTTTTCGGTAATTGTATATCTTTAAATT
| 5Bacillus anthracis str. Ames
|
G000009925
|
ASM992v1
|
GCF_000009925.1
|
PRJNA58195
|
SAMD00061068
| null |
2004/09/16
|
Kitasato Univ.
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/925/GCF_000009925.1_ASM992v1
| 637,000,025
|
RS_GCF_000009925.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 295,405
| 817
|
Bacteroides fragilis YCH46
|
strain=YCH46
| null |
Bacteria
|
Bacteroidetes
|
Bacteroidia
|
Bacteroidales
|
Bacteroidaceae
|
Bacteroides
|
Bacteroides fragilis
| true
|
Eubacteria
|
Bacteroidetes
| 1
| 0.998
| 0.9
| 1
| 5,310,990
| 2
| 43.2
| 5,277,274
| 1
| 4,416
| 1,603,639
| 88.979964
| 99.26
| 0
| 0
| 347
|
yes
|
yes
|
yes
| 20
|
high
| 2,556,190
| 0
|
ATGGAAGTGCCGTATATGACCAGAGGCTTTTCTTGTGAAACCGGAAGAAAACGGAAAGAAGCGTCGGCAGGAACACCTATCTCCATCCATGATACACTGTTGTATAGCGGCAGGAATAGTTGGTATTCAAATCCGTTGCCGGATTTAGCC
| 10Bacteroides fragilis YCH46
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 3,281,700
| 1
|
CTACTCTCAGCAAAACGGGGGACGGGCATCAGAGACCAGCAGTAACTGCCACAACCCATCCTGAGCGCTGTGGAGAGGGGACAAGCCGCTCAGGGCACGAAGATTCTCCCACAGCAGGAGCCCAGCCCCGGCTTTGTCCAGCTTGGTCCC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,217,100
| 1
|
TCCTAACCAGTCTTCCCACCTCCTTCCACCTGGGCTGCCTGGTCTTCCATCACCTGGTCAACATGGACTCGGCATCTGCTGGGTGCCAGGCACTGTTCTGGGCTCTGGGGAATCCTTATTCTCCTGTAGTTTCTATTCTAGCGGGGGAGA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 230,250
| 1
|
GACAGAATTCCAACAGCGGCCGTGTGGCTGCAGAGCCTCTCTCCCTCCCTGCCTCACCCTCGAGTCCCCGCCTGGGAGGGCTCAGGGTCACTCACTAAGCATCTTTCCCATGCGCTGCTGTGAGGCTGCTGCTATTAACTTGCTACTATG
| 120homo sapiens
|
G000007865
|
ASM786v1
|
GCF_000007865.1
|
PRJNA224116
|
SAMN02604086
| null |
2004/01/30
|
Univ. Minnesota
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/865/GCF_000007865.1_ASM786v1
| 637,000,168
|
RS_GCF_000007865.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 262,316
| 1,764
|
Mycobacterium avium subsp. paratuberculosis K-10
|
strain=K-10
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Corynebacteriales
|
Mycobacteriaceae
|
Mycobacterium
|
Mycobacterium avium
| true
|
Eubacteria
|
Actinobacteria
| 1
| 1
| 1
| 1
| 4,829,781
| 1
| 69.3
| 4,829,781
| 1
| 4,544
| 1,497,326
| 91.345322
| 99.28
| 0.33
| 0
| 336
|
yes
|
yes
|
yes
| 20
|
high
| 2,794,870
| 0
|
GCACCAACGCGCGCGTCGCCGAGCTGCTCGAGACTGTGGGGCTGCCGCGGGCCGACGCGGCCCGCTACCCCGCGGAGTTCTCCGGCGGCCAGAAACAGCGCATCGGTATCGCGCGAGCGCTGGCGCTGCAACCGAAGATCCTCGCGCTCG
| 65Mycobacterium avium subsp. paratuberculosis K-10
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 2,417,700
| 1
|
CAGATGTATGTCCATACACCCACCTACATGTGTACCCACACATGACGTACATGTACACACACTCCTGATGACCTCTCCCAGGACCCAGGGCCCAAGGCCCCTCCAGCCTTCAGACACATTCTGTGTCCTGGGACCGGGATTCTCAATGGC
| 120homo sapiens
|
G000006845
|
ASM684v1
|
GCF_000006845.1
|
PRJNA57611
|
SAMN02604088
| null |
2005/02/14
|
Univ. Oklahoma
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/845/GCF_000006845.1_ASM684v1
| 637,000,188
|
RS_GCF_000006845.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 242,231
| 485
|
Neisseria gonorrhoeae FA 1090
|
strain=FA 1090
| null |
Bacteria
|
Proteobacteria
|
Betaproteobacteria
|
Neisseriales
|
Neisseriaceae
|
Neisseria
|
Neisseria gonorrhoeae
| true
|
Eubacteria
|
Proteobacteria
| 1
| 1
| 1
| 1
| 2,153,922
| 1
| 52.69
| 2,153,922
| 1
| 2,142
| 609,210
| 83.31778
| 99.82
| 0.21
| 0
| 323
|
yes
|
yes
|
yes
| 20
|
high
| 417,820
| 0
|
CGTTTTGCGAGGCGGCGAACCTGCCGTGTGCCAAGCCTTGTTTGAACGTGCCCGACAATGCCATATTGCGGAATTTGGTACTGTCGGAATTGAACGGCTCGAGAAATACTTCGCGGCCGGCGGCAACGGTATAAACGCCTTGCCCGTCGA
| 66Neisseria gonorrhoeae FA 1090
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 1,658,400
| 1
|
TTGCTACCTTAAACTCATTTCCTGATTGGATCAACCCCCCCACTCCAGTGCTTGTCCCTCACTCCCTTGCGCTCTGGCCAGGGCAGCCCCTGGGATGGCTCTGAGCCCTGGGTTCTGCCCTGAGGATTCAGCTCCAGGTGCCCAGCGGTA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 479,250
| 1
|
TGGGGACGGGGCCGGGCGATGGTCCTGAGCACCTGCTCCTGCCCTCAGGTTTGACACAGGTTCGGGGCCGGCGGTGCTGACCAGTGCCGTGCCGGTAGAGCCGGGCCAGTGGCACCGCCTGGAGCTGTCCCGGCACTGGCGCCGGGGCAC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 6,264,750
| 1
|
CGCGCACACACACACGCGCACAAACACACACGCACGCACACACACGCACACACACACACGCACGCACACACACACGCACACACTCACACACACACACGCACGCACACGCACGCACACACACACAAACTACTATGTTTGCTGGGCCTGAAT
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 1,803,600
| 1
|
TTTTTCATGTGTTTTTTGGTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTTGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTA
| 120homo sapiens
|
G000008345
|
ASM834v1
|
GCF_000008345.1
|
PRJNA224116
|
SAMN02603281
| null |
2004/07/30
|
Goettingen Genomics Laboratory
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/345/GCF_000008345.1_ASM834v1
| 637,000,215
|
RS_GCF_000008345.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 267,747
| 1,747
|
Propionibacterium acnes KPA171202
|
strain=KPA171202
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Propionibacteriales
|
Propionibacteriaceae
|
Cutibacterium
|
Cutibacterium acnes
| true
|
Eubacteria
|
Actinobacteria
| 1
| 1
| 1
| 1
| 2,560,265
| 1
| 60.01
| 2,560,265
| 1
| 2,373
| 780,330
| 89.799572
| 100
| 0
| 0
| 319
|
yes
|
yes
|
yes
| 20
|
high
| 735,020
| 0
|
TGGCCGACTGACGCCGCCGCGAGAACTACGAGAGAGTCAGCAAGAGAGAACTTATTGAGGATGGCGAATCCAGCGCACGCGACGCCACCAGCGAGAACCGTTTGCCATTCTGCCCACTTGGGACGCACCGTACGTGAAATGTAATCCAAT
| 77Propionibacterium acnes KPA171202
|
G000006965
|
ASM696v1
|
GCF_000006965.1
|
PRJNA57603
|
SAMEA3283068
| null |
2003/05/06
|
MELILO
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
| 637,000,269
|
RS_GCF_000006965.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 266,834
| 382
|
Sinorhizobium meliloti 1021
|
strain=1021
| null |
Bacteria
|
Proteobacteria
|
Alphaproteobacteria
|
Rhizobiales
|
Rhizobiaceae
|
Sinorhizobium
|
Sinorhizobium meliloti
| true
|
Eubacteria
|
Proteobacteria
| 1
| 0.997
| 0.1
| 1
| 6,691,694
| 3
| 62.17
| 3,654,135
| 1
| 6,303
| 1,956,944
| 86.157242
| 99.28
| 0.31
| 0
| 373
|
yes
|
yes
|
yes
| 20
|
high
| 2,501,720
| 0
|
GCGCATTCACGCATTCATGTGCGGCCTCGGGACGCAAAGTATAAAGCAATTCGAGGAAAATGACGTACGGTTTTGCGCCGGGAGTAGAGCCGAAATAACAAAGCCGGGCACTGGGCCCGGCTTTGTCGTCGATGAAAAGGTCCAGGGATC
| 86Sinorhizobium meliloti 1021
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,618,800
| 1
|
TAGCGGAGACGGGGTTTCACCCTGTTAGCCAGGACGATCCACGAGCATTTTTATGGATTCCTTTCTTTTTTTTACATGACTCCATCTTTTTTTGGATGTGCTTCACAGTAAGTTGCAGTGGTCAGTACACTTTGTCCCTGAACACTTCAA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,271,700
| 1
|
ATGGCTGTCATCTAGCTATTGTAAAGGGCATATGTATGAAATATAGCCAGTGCAACTCAGGAACTGGGTTTCTAATTTTATTTAAGTTTAAATAGCCATTGGATAGAGCAGCTTTTTGAAAGTGGCCTTCACTGAAACAGAGTTCATGCA
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 2,869,650
| 1
|
CGGAAGGAAGCAGCATGTTTTCGGGGACCCTGTGGTTTCTGGGTGCTGCTGTTCCCACCTGGCGAGCGCTGCCTTCTGCACGCTGCCAGGGCTGTGTGTGTACGCCGTCCCTCATTCCCTCGTGCAGCCTGGGAAAGCCTTACCCAGTGC
| 120homo sapiens
|
G000006925
|
ASM692v2
|
GCF_000006925.2
|
PRJNA62907
|
SAMN02603599
| null |
2011/08/03
|
Microbial Genome Center of ChMPH
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/925/GCF_000006925.2_ASM692v2
| 637,000,264
|
RS_GCF_000006925.2
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 198,214
| 623
|
Shigella flexneri 2a str. 301
|
strain=301
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Enterobacterales
|
Enterobacteriaceae
|
Shigella
|
Shigella flexneri
| true
|
Eubacteria
|
Proteobacteria
| 1
| 0.998
| 1
| 1
| 4,828,820
| 2
| 50.65
| 4,607,202
| 1
| 5,003
| 1,415,151
| 86.329724
| 99.7
| 0.21
| 0
| 372
|
yes
|
yes
|
yes
| 20
|
high
| 1,763,320
| 0
|
TGATAATAAGATCATATTAGAGAACTTGAACTTTCATGTTTCGCCAGGCAAATGGCTATTACTGAAAGGCTACTCTGGTGCGGGAAAAACCACACTGCTTAAAACATTATCCCACTGCTGGCCGTGGTTTAAAGGTGATATTTCTTCTCC
| 85Shigella flexneri 2a str. 301
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 382,800
| 1
|
GCCCAGGTAAGCCTTGATGTCCACACGAAGCTTCCCCCAGAGCGGGCTGCTGGACGGCTGCAGCATCCTGCAGAGAGACCACCCACCCCTGGCTGGGAGGCCCCACGGCTCGGACGCGAGGCTGCTCAGCATGTTGGCGCGTGCCCTGGC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 9,244,350
| 1
|
GAGAATTGTTTGAACCTGGGAGGCGGGGATTGCAGTGAGCGGAGATTGTGCCAGTGCACTCCAGCCTGGGCGACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAATCCAATAAGATATGAGAGCCAATTATGTTCACAAGAT
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 8,927,400
| 1
|
CTGAAGCGAGTTAAAGCTGGGTCTCTCTCACCTGCAGCAACCAAGCAGTCAGACCCCCCTCCTCCTGAAGGACCCGAAGGACCCCTCCCAGAGGCAGAACTGGCTTTCCTGGGACCCTGAGAGAGGGAGGATGTTGCCCATGGCATTGAA
| 120homo sapiens
|
G000010165
|
ASM1016v1
|
GCF_000010165.1
|
PRJNA224116
|
SAMD00060942
| null |
2009/04/01
|
National Institute of Technology and Evaluation
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
| 643,692,011
|
RS_GCF_000010165.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 358,681
| 1,393
|
Brevibacillus brevis NBRC 100599
|
strain=NBRC 100599 (= 47)
| null |
Bacteria
|
Firmicutes
|
Bacilli
|
Bacillales
|
Paenibacillaceae
|
Brevibacillus
|
Brevibacillus brevis
| true
|
Eubacteria
|
Firmicutes
| 1
| 1
| 1
| 1
| 6,296,436
| 1
| 47.27
| 6,296,436
| 1
| 5,917
| 1,875,522
| 87.757979
| 99.73
| 0.27
| 0
| 381
|
yes
|
yes
|
yes
| 20
|
high
| 3,798,470
| 0
|
CTCCGAGCGATAAATCGTCCAGATAATACAGCTCAAGATATTCTCGCTGCTTGCCCTTGAGTAGCGGCGCGTAAAAGTCAAACAAGAGATTGACTTGATTGGTCTTTTCTAACATGAAACCAATCCTTTGCTATGAGGTACTCGTTTCAA
| 15Brevibacillus brevis NBRC 100599
|
G000009765
|
ASM976v2
|
GCF_000009765.2
|
PRJNA224116
|
SAMD00061088
| null |
2016/03/24
|
NITE
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
| 637,000,304
|
RS_GCF_000009765.2
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Minor
| 227,882
| 33,903
|
Streptomyces avermitilis MA-4680 = NBRC 14893
|
strain=MA-4680
| null |
Bacteria
|
Actinobacteria
|
Actinobacteria
|
Streptomycetales
|
Streptomycetaceae
|
Streptomyces
|
Streptomyces avermitilis
| true
|
Eubacteria
|
Actinobacteria
| 1
| 0.999
| 1
| 1
| 9,119,895
| 2
| 70.7
| 9,025,608
| 1
| 7,915
| 2,675,970
| 86.456522
| 99.89
| 0.79
| 0
| 356
|
yes
|
yes
|
yes
| 20
|
high
| 1,174,030
| 0
|
CGGTTGTCGTGGTGGGTGGTTGGAGCCAGTAGTGCTGGTGTTGGAAGGGGTAGGTGGGCAGGTCGAGGTGGTGGTTGTGGGGGTGGGGGTGGGTTTGGGTGTAGTGGTGGTGCCAGGTGGTGGGTGTCCGAATGCCGGTGGTGTGGGTGT
| 95Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
|
G000009245
|
ASM924v1
|
GCF_000009245.1
|
PRJNA224116
|
SAMEA3138197
| null |
2006/03/02
|
LLNL
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/245/GCF_000009245.1_ASM924v1
| 637,000,111
|
RS_GCF_000009245.1
|
Monoisolate
|
Complete Genome
|
Full
|
na
|
Major
| 376,619
| 263
|
Francisella tularensis subsp. holarctica LVS
|
strain=LVS
| null |
Bacteria
|
Proteobacteria
|
Gammaproteobacteria
|
Thiotrichales
|
Francisellaceae
|
Francisella
|
Francisella tularensis
| true
|
Eubacteria
|
Proteobacteria
| 1
| 1
| 0.9
| 1
| 1,895,994
| 1
| 32.15
| 1,895,994
| 1
| 2,100
| 571,581
| 88.799806
| 99.82
| 0.41
| 100
| 311
|
yes
|
yes
|
yes
| 20
|
high
| 1,713,140
| 0
|
GATACCTTTGTTTTTTAACTCTTGTGCCATTGCCTCAGCAGTTTTTCTGAGTCCTTGTGGATCTGCAAGCAAAGGAGTAATGTCGCGAAACATAATTCCTGGTTTTGGAAAATCAGGCACAGCTGCAATCTTACTCTTAATAAAATCTAA
| 40Francisella tularensis subsp. holarctica LVS ASM924v1
|
G000009925
|
ASM992v1
|
GCF_000009925.1
|
PRJNA58195
|
SAMD00061068
| null |
2004/09/16
|
Kitasato Univ.
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/925/GCF_000009925.1_ASM992v1
| 637,000,025
|
RS_GCF_000009925.1
|
Monoisolate
|
Complete Genome
|
Full
|
reference genome
|
Major
| 295,405
| 817
|
Bacteroides fragilis YCH46
|
strain=YCH46
| null |
Bacteria
|
Bacteroidetes
|
Bacteroidia
|
Bacteroidales
|
Bacteroidaceae
|
Bacteroides
|
Bacteroides fragilis
| true
|
Eubacteria
|
Bacteroidetes
| 1
| 0.998
| 0.9
| 1
| 5,310,990
| 2
| 43.2
| 5,277,274
| 1
| 4,416
| 1,603,639
| 88.979964
| 99.26
| 0
| 0
| 347
|
yes
|
yes
|
yes
| 20
|
high
| 4,905,290
| 0
|
TAAATATTTTGTTTTATCTTCTTCCGTAATTTCCCGAATCACGCGACAAGGATTACCCGCAGCAATCACATTGGCAGGAATATCTCTATTTACTACACTTCCCGCACCTATCACTGTGTTGTCACCAATCGTCACGCCCGGTAATACGCA
| 10Bacteroides fragilis YCH46
|
G000009305
|
ASM930v1
|
GCF_000009305.1
|
PRJNA224116
|
SAMEA3138199
| null |
2006/06/28
|
Penn State Univ.
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/305/GCF_000009305.1_ASM930v1
| 637,000,130
|
RS_GCF_000009305.1
|
Monoisolate
|
Complete Genome
|
Full
|
representative genome
|
Major
| 382,638
| 212
|
Helicobacter acinonychis str. Sheeba
|
strain=Sheeba
| null |
Bacteria
|
Proteobacteria
|
Epsilonproteobacteria
|
Campylobacterales
|
Helicobacteraceae
|
Helicobacter
|
Helicobacter acinonychis
| true
|
Eubacteria
|
Proteobacteria
| 1
| 0.994
| 0.9
| 1
| 1,557,588
| 2
| 38.17
| 1,553,927
| 1
| 1,547
| 470,618
| 89.011857
| 99.12
| 0.7
| 100
| 271
|
yes
|
yes
|
yes
| 20
|
high
| 515,580
| 0
|
AAGCGTTGTGTTGCCAGGAGTTGAAGGGGAATTTGGGGTTCTTTATGGGCATAGCAACATGATCACTTTGCTCCAAGCGGGAGTGATTGAGATTGAAACCGAGAGTCAAAAAGAACACATTGCGATTAGTTGGGGCTATGCAGAAGTCAC
| 46Helicobacter acinonychis str. Sheeba
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 696,000
| 1
|
TTCTCCTGCCTCGGCTTCCCGAGTAGCTGGGACTACAGGTGTGCGCCATCATGCCCAGCTAATATTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGACCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCCGCCTGAGC
| 120homo sapiens
|
human
| null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | 7,926,600
| 1
|
ACATGAATGAAAGTTTAATGGCATCAAATCAACTATGGATTACTAGTATCCAGGTAAAAGTAAAAACTATATAGAGTTGAAAATGTTGCTAAGAAAATATATTAACATATAAAAATACCTTTTAAAACTTCCTTCATTTTTTGTTTATAA
| 120homo sapiens
|
G000009185
|
ASM918v1
|
GCF_000009185.1
|
PRJNA224116
|
SAMEA3138195
| null |
2006/06/22
|
Max Planck Institute
|
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/185/GCF_000009185.1_ASM918v1
| 637,000,129
|
RS_GCF_000009185.1
|
Monoisolate
|
Complete Genome
|
Full
|
na
|
Major
| 362,976
| 293,091
|
Haloquadratum walsbyi DSM 16790
|
strain=DSM 16790 = HBSQ001
| null |
Archaea
|
Euryarchaeota
|
Halobacteria
|
Haloferacales
|
Haloferacaceae
|
Haloquadratum
|
Haloquadratum walsbyi
| true
|
Archaea
|
Euryarchaeota
| 1
| 0.997
| 0.9
| 1
| 3,179,361
| 2
| 47.86
| 3,132,494
| 1
| 3,071
| 845,315
| 78.317152
| 99.3
| 0
| 0
| 220
|
no
|
yes
|
yes
| 19
|
medium
| 2,913,170
| 0
|
GTCCGATCAACGGGTGATCCAACAGCAAATGCAACAGGCGCACTGGGTGTGTTTGTCTCTGTCTATGAATTTCTCAATATTCCATTCACCCTGGCGACAGTCGTCGGTGGTGTGATGAGTGTCTTGACTATTCGCTATATTTCGAGTTTT
| 45Haloquadratum walsbyi DSM 16790 DSM 16790 = HBSQ001
|
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